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Packages that use GenomeRangeVisitor | |
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org.utgenome.gwt.utgb.client.bio | Biological data objects for Google Web Toolkit RPC (Remote Procedure Call). |
org.utgenome.gwt.utgb.client.canvas | Browser-side graphic drawing libraries using HTML canvas (or VML in IE). |
Uses of GenomeRangeVisitor in org.utgenome.gwt.utgb.client.bio |
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Classes in org.utgenome.gwt.utgb.client.bio that implement GenomeRangeVisitor | |
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class |
GenomeRangeVisitorBase
Refereece implementation of the GenomeRangeVisitor . |
class |
InfoSilkGenerator
Generating read information in Silk format, which is used for displaying mouse over message |
Methods in org.utgenome.gwt.utgb.client.bio with parameters of type GenomeRangeVisitor | |
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void |
SAMRead.accept(GenomeRangeVisitor visitor)
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void |
SAMReadPairFragment.accept(GenomeRangeVisitor visitor)
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void |
ReferenceSequence.accept(GenomeRangeVisitor visitor)
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void |
ReadList.accept(GenomeRangeVisitor visitor)
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void |
CompactWIGData.accept(GenomeRangeVisitor visitor)
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void |
ReadCoverage.accept(GenomeRangeVisitor visitor)
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void |
BEDGene.accept(GenomeRangeVisitor visitor)
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void |
Read.accept(GenomeRangeVisitor visitor)
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void |
Gene.accept(GenomeRangeVisitor visitor)
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void |
SAMReadLight.accept(GenomeRangeVisitor visitor)
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void |
Interval.accept(GenomeRangeVisitor visitor)
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void |
GenomeRange.accept(GenomeRangeVisitor visitor)
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void |
SAMReadPair.accept(GenomeRangeVisitor visitor)
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void |
Gap.accept(GenomeRangeVisitor visitor)
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Uses of GenomeRangeVisitor in org.utgenome.gwt.utgb.client.canvas |
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Classes in org.utgenome.gwt.utgb.client.canvas that implement GenomeRangeVisitor | |
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static class |
IntervalLayout.IntervalRetriever
Retrieves the interval (x1, x2) and the height of OnGenome objects |
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