org.utgenome.format.fasta
Interface CompactFASTA.PacFileAccess

All Known Implementing Classes:

CompactFASTA.OnDiskAccess, CompactFASTA.OnMemoryBuffer

Enclosing class:

CompactFASTA

public static interface CompactFASTA.PacFileAccess

Method Summary

void	close()
void	readNSeq(long cursor, byte[] buf)
void	readSeq(long cursor, byte[] buf)

Method Detail

readSeq

void readSeq(long cursor,
             byte[] buf)
             throws IOException

Throws:

IOException

readNSeq

void readNSeq(long cursor,
              byte[] buf)
              throws IOException

Throws:

IOException

close

void close()
           throws IOException

Throws:

IOException