Uses of Interface
org.utgenome.format.fasta.GenomeSequence

Packages that use GenomeSequence

org.utgenome.format.fasta

FASTA utilities

Uses of GenomeSequence in org.utgenome.format.fasta

Classes in org.utgenome.format.fasta that implement GenomeSequence

class	CompactACGT Compact array for ACGT (and N) sequences
static class	FASTA.RawStringWrapper
class	Kmer K-mer integer representation of ACGT.

Methods in org.utgenome.format.fasta that return GenomeSequence

GenomeSequence	CompactFASTA.getSequence(String chr)
GenomeSequence	CompactFASTA.getSequence(String chr, int start)