Package org.utgenome.format.bed

Interface Summary
BEDQuery An interface for extracting BED entries using BED2SilkReader.
 

Class Summary
BED2Silk Converting BED into Silk format.
BED2Silk.BEDHeaderAttribute  
BED2Silk.BEDHeaderDescription  
BED2SilkReader BED2SilkReader read the input BED data, and the user can read it as if it were a Silk format.
BEDDatabase Query/Update interface for BED database stored in SQLite
BEDDatabase.BEDRangeQuery  
BEDDatabase.DBBuilder  
BEDEntry Representing each gene line of BED format
BEDLexer  
BEDParser  
BEDParser.attribute_return  
BEDParser.attributeValue_return  
BEDParser.description_return  
BEDParser.descriptionName_return  
BEDTrack BEDTrack represents a track line in BED files.
 



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