org.utgenome.format.sam
Class Sam2WigConverter.SAMRecordCursor

java.lang.Object
  org.utgenome.format.sam.Sam2WigConverter.SAMRecordCursor

All Implemented Interfaces:

Iterator<GenomeRange>

Enclosing class:

Sam2WigConverter

public static class Sam2WigConverter.SAMRecordCursor
extends Object
implements Iterator<GenomeRange>

Iterator of SAMRecord

Author:

leo

Constructor Summary

Sam2WigConverter.SAMRecordCursor(net.sf.samtools.SAMRecordIterator cursor)

Method Summary

void	close()
boolean	hasNext()
GenomeRange	next()
void	remove()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Sam2WigConverter.SAMRecordCursor

public Sam2WigConverter.SAMRecordCursor(net.sf.samtools.SAMRecordIterator cursor)

Method Detail

hasNext

public boolean hasNext()

Specified by:

hasNext in interface Iterator<GenomeRange>

next

public GenomeRange next()

Specified by:

next in interface Iterator<GenomeRange>

remove

public void remove()

Specified by:

remove in interface Iterator<GenomeRange>

close

public void close()