Uses of Class
org.utgenome.format.axt.AXTAlignment

Packages that use AXTAlignment

org.utgenome.format.axt

Uses of AXTAlignment in org.utgenome.format.axt

Methods in org.utgenome.format.axt that return AXTAlignment

static AXTAlignment

AXTLens.lens(List<String> axtBlock)

Methods in org.utgenome.format.axt that return types with arguments of type AXTAlignment

static Iterable<AXTAlignment>

AXTLens.lens(BufferedReader in)

Methods in org.utgenome.format.axt with parameters of type AXTAlignment

static void

AXTLens.parseSummaryLine(AXTAlignment obj, String summaryLine)

Method parameters in org.utgenome.format.axt with type arguments of type AXTAlignment

static void	AXTLens.lens(BufferedReader in, org.xerial.util.ObjectHandler<AXTAlignment> handler)
static void	AXTLens.lens(File axtFile, org.xerial.util.ObjectHandler<AXTAlignment> handler)