org.utgenome.core.cui
Class UTGBCommandBase

java.lang.Object
  org.utgenome.core.cui.UTGBCommandBase

All Implemented Interfaces:

org.xerial.util.opt.Command

Direct Known Subclasses:

Convert, DrawHistogram, ImportBustard, ReadStat, SAM2Silk, ScreenShot, Snappy, UTGBShellCommandBase

public abstract class UTGBCommandBase
extends Object
implements org.xerial.util.opt.Command

Constructor Summary

UTGBCommandBase()

Method Summary

void	execute(org.xerial.util.opt.GlobalCommandOption globalOption, String[] args)
abstract void	execute(String[] args)
URL	getHelpMessageResource()
abstract String	getOneLineDescription()
Object	getOptionHolder()
abstract String	name()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

UTGBCommandBase

public UTGBCommandBase()

Method Detail

getOptionHolder

public Object getOptionHolder()

Specified by:

getOptionHolder in interface org.xerial.util.opt.Command

getHelpMessageResource

public URL getHelpMessageResource()

Specified by:

getHelpMessageResource in interface org.xerial.util.opt.Command

execute

public abstract void execute(String[] args)
                      throws Exception

Specified by:

execute in interface org.xerial.util.opt.Command

Throws:

Exception

execute

public void execute(org.xerial.util.opt.GlobalCommandOption globalOption,
                    String[] args)
             throws Exception

Specified by:

execute in interface org.xerial.util.opt.Command

Throws:

Exception

getOneLineDescription

public abstract String getOneLineDescription()

Specified by:

getOneLineDescription in interface org.xerial.util.opt.Command

name

public abstract String name()

Specified by:

name in interface org.xerial.util.opt.Command