1 /*--------------------------------------------------------------------------
2 * Copyright 2009 utgenome.org
3 *
4 * Licensed under the Apache License, Version 2.0 (the "License");
5 * you may not use this file except in compliance with the License.
6 * You may obtain a copy of the License at
7 *
8 * http://www.apache.org/licenses/LICENSE-2.0
9 *
10 * Unless required by applicable law or agreed to in writing, software
11 * distributed under the License is distributed on an "AS IS" BASIS,
12 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 * See the License for the specific language governing permissions and
14 * limitations under the License.
15 *--------------------------------------------------------------------------*/
16 //--------------------------------------
17 // utgb-core Project
18 //
19 // BSSRead.java
20 // Since: Oct 14, 2009
21 //
22 // $URL$
23 // $Author$
24 //--------------------------------------
25 package org.utgenome.gwt.utgb.client.bio;
26
27 /**
28 * BSS read data object
29 *
30 * @author leo
31 *
32 */
33 public class BSSRead extends Read {
34
35 /**
36 *
37 */
38 private static final long serialVersionUID = 1L;
39
40 public int queryLength;
41 public double similarity;
42 public double queryCoverage;
43 public String evalue;
44 public int bitScore;
45 public String targetSequence;
46 public String querySequence;
47 public String alignment;
48
49 }