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A
accept(String)
- Method in class org.utgenome.shell.
Create.CreateAllScaffoldFileFilter
accept(String)
- Method in interface org.utgenome.shell.
Create.ScaffoldFileFilter
AddAction
- Class in
org.utgenome.shell
A UTGBShell sub-command for adding new action class
AddAction()
- Constructor for class org.utgenome.shell.
AddAction
addContext(String, String)
- Method in class org.utgenome.shell.tomcat.
TomcatServer
addServerListener(ServerListener)
- Method in class org.utgenome.shell.
UTGBPortable
afterStart()
- Method in interface org.utgenome.shell.
ServerListener
afterStart()
- Method in class org.utgenome.shell.
UTGBPortableWidget
afterStop()
- Method in interface org.utgenome.shell.
ServerListener
afterStop()
- Method in class org.utgenome.shell.
UTGBPortableWidget
answerYes
- Variable in class org.utgenome.shell.
UTGBShell.UTGBShellOption
APP_FOLDER
- Static variable in class org.utgenome.shell.
UTGBShellCommand
B
beforeStart()
- Method in interface org.utgenome.shell.
ServerListener
beforeStart()
- Method in class org.utgenome.shell.
UTGBPortableWidget
beforeStop()
- Method in interface org.utgenome.shell.
ServerListener
beforeStop()
- Method in class org.utgenome.shell.
UTGBPortableWidget
buildGUI()
- Method in class org.utgenome.shell.
UTGBPortableWidget
C
Clean
- Class in
org.utgenome.shell
UTGB Shell Sub Command for cleaning target directory
Clean()
- Constructor for class org.utgenome.shell.
Clean
clearStatus()
- Method in class org.utgenome.shell.
UTGBPortableWidget
compareTo(UTGBShellCommand)
- Method in class org.utgenome.shell.
UTGBShellCommand
Compile
- Class in
org.utgenome.shell
A UTGBShell sub command for compiling java source codes with Maven
Compile()
- Constructor for class org.utgenome.shell.
Compile
copyFile(InputStream, File)
- Static method in class org.utgenome.shell.
ScaffoldGenerator
copyScaffold(String, String)
- Method in class org.utgenome.shell.
ScaffoldGenerator
Creates the folder structure for the Tomcat
Create
- Class in
org.utgenome.shell
Create sub command
Create()
- Constructor for class org.utgenome.shell.
Create
Create.CreateAllScaffoldFileFilter
- Class in
org.utgenome.shell
Create.CreateAllScaffoldFileFilter()
- Constructor for class org.utgenome.shell.
Create.CreateAllScaffoldFileFilter
Create.OverwriteMode
- Enum in
org.utgenome.shell
Create.ScaffoldFileFilter
- Interface in
org.utgenome.shell
createContextXML(String, String, boolean)
- Method in class org.utgenome.shell.
UTGBShellCommand
createEclipseLaunchFile(String, String, String)
- Method in class org.utgenome.shell.
ScaffoldGenerator
createFileFromTemplate(Class<?>, String, String, Properties)
- Method in class org.utgenome.shell.
UTGBShellCommand
createFileFromTemplate(Class<?>, String, String, String, Properties, boolean)
- Static method in class org.utgenome.shell.
UTGBShellCommand
createGWTModuleScaffold(UTGBConfig)
- Method in class org.utgenome.shell.
ScaffoldGenerator
createProjectScaffold(UTGBConfig)
- Method in class org.utgenome.shell.
ScaffoldGenerator
createScaffold(UTGBConfig, String, Create.ScaffoldFileFilter)
- Static method in class org.utgenome.shell.
Create
createTitledBorder(String)
- Static method in class org.utgenome.shell.
UTGBPortableWidget
D
Deploy
- Class in
org.utgenome.shell
Deploy()
- Constructor for class org.utgenome.shell.
Deploy
detectFileType(String)
- Static method in class org.utgenome.shell.
Import
E
Eclipse
- Class in
org.utgenome.shell
A sub command to generate Eclipse project files
Eclipse()
- Constructor for class org.utgenome.shell.
Eclipse
environment
- Variable in class org.utgenome.shell.
UTGBShell.UTGBShellOption
exec(String)
- Static method in class org.utgenome.shell.
Maven.CommandExecutor
exec(String, String[], File)
- Static method in class org.utgenome.shell.
Maven.CommandExecutor
execCommand(String, String[], File)
- Method in class org.utgenome.shell.
Maven.CommandExecutor
execute(String[])
- Method in class org.utgenome.shell.
AddAction
execute(String[])
- Method in class org.utgenome.shell.
Clean
execute(String[])
- Method in class org.utgenome.shell.
Compile
execute(String[])
- Method in class org.utgenome.shell.
Create
execute(String[])
- Method in class org.utgenome.shell.
Deploy
execute(String[])
- Method in class org.utgenome.shell.
Eclipse
execute(String[])
- Method in class org.utgenome.shell.
FastqRename
execute(String[])
- Method in class org.utgenome.shell.
FastqToFasta
execute(String[])
- Method in class org.utgenome.shell.
FastqToSAM
execute(String[])
- Method in class org.utgenome.shell.
GWT
execute(String[])
- Method in class org.utgenome.shell.
GWTCompile
execute(String[])
- Method in class org.utgenome.shell.
Illumina2Fastq
execute(String[])
- Method in class org.utgenome.shell.
Import
execute(String[])
- Method in class org.utgenome.shell.
Keyword
execute(String[])
- Method in class org.utgenome.shell.
Maven
execute(String[])
- Method in class org.utgenome.shell.
Pack
execute(String[])
- Method in class org.utgenome.shell.
QSeqToFastq
execute(String[])
- Method in class org.utgenome.shell.
Repair
execute(String[])
- Method in class org.utgenome.shell.
Sam2Wig
execute(String[])
- Method in class org.utgenome.shell.
SAMToFastq
execute(String[])
- Method in class org.utgenome.shell.
ScreenShot
execute(String[])
- Method in class org.utgenome.shell.
Sequence
execute(String[])
- Method in class org.utgenome.shell.
Server
execute(String[])
- Method in class org.utgenome.shell.
SVNAdd
execute(String[])
- Method in class org.utgenome.shell.
Upgrade
execute(UTGBShell.UTGBShellOption, String[])
- Method in class org.utgenome.shell.
UTGBShellCommand
execute(String[])
- Method in class org.utgenome.shell.
UTGBShellCommand
EXPLODED_WEBAPP_DIR
- Static variable in class org.utgenome.shell.
UTGBShellCommand
F
FastqRename
- Class in
org.utgenome.shell
FastqRename()
- Constructor for class org.utgenome.shell.
FastqRename
FastqToFasta
- Class in
org.utgenome.shell
fastq2fasta command
FastqToFasta()
- Constructor for class org.utgenome.shell.
FastqToFasta
FastqToSAM
- Class in
org.utgenome.shell
FastqToSAM()
- Constructor for class org.utgenome.shell.
FastqToSAM
findDir(String)
- Method in class org.utgenome.shell.tomcat.
TomcatServer
G
generateServerURLLinkHTML()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getAjp13port()
- Method in class org.utgenome.shell.tomcat.
TomcatServerConfiguration
getCatalinaBase()
- Method in class org.utgenome.shell.tomcat.
TomcatServerConfiguration
getConfigFile()
- Method in class org.utgenome.shell.
UTGBShellCommand
getContextPath()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getGWTModuleName()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getObsolteConfigurationFile()
- Method in class org.utgenome.shell.
UTGBShellCommand
getOneLinerDescription()
- Method in class org.utgenome.shell.
AddAction
getOneLinerDescription()
- Method in class org.utgenome.shell.
Clean
getOneLinerDescription()
- Method in class org.utgenome.shell.
Compile
getOneLinerDescription()
- Method in class org.utgenome.shell.
Create
getOneLinerDescription()
- Method in class org.utgenome.shell.
Deploy
getOneLinerDescription()
- Method in class org.utgenome.shell.
Eclipse
getOneLinerDescription()
- Method in class org.utgenome.shell.
FastqRename
getOneLinerDescription()
- Method in class org.utgenome.shell.
FastqToFasta
getOneLinerDescription()
- Method in class org.utgenome.shell.
FastqToSAM
getOneLinerDescription()
- Method in class org.utgenome.shell.
GWT
getOneLinerDescription()
- Method in class org.utgenome.shell.
GWTCompile
getOneLinerDescription()
- Method in class org.utgenome.shell.
Illumina2Fastq
getOneLinerDescription()
- Method in class org.utgenome.shell.
Import
getOneLinerDescription()
- Method in class org.utgenome.shell.
Keyword
getOneLinerDescription()
- Method in class org.utgenome.shell.
Maven
getOneLinerDescription()
- Method in class org.utgenome.shell.
Pack
getOneLinerDescription()
- Method in class org.utgenome.shell.
QSeqToFastq
getOneLinerDescription()
- Method in class org.utgenome.shell.
Repair
getOneLinerDescription()
- Method in class org.utgenome.shell.
Sam2Wig
getOneLinerDescription()
- Method in class org.utgenome.shell.
SAMToFastq
getOneLinerDescription()
- Method in class org.utgenome.shell.
ScreenShot
getOneLinerDescription()
- Method in class org.utgenome.shell.
Sequence
getOneLinerDescription()
- Method in class org.utgenome.shell.
Server
getOneLinerDescription()
- Method in class org.utgenome.shell.
SVNAdd
getOneLinerDescription()
- Method in class org.utgenome.shell.
Upgrade
getOneLinerDescription()
- Method in class org.utgenome.shell.
UTGBShellCommand
getOptionHolder()
- Method in class org.utgenome.shell.
Server
getOptionHolder()
- Method in class org.utgenome.shell.
UTGBShellCommand
getOSType()
- Static method in enum org.utgenome.shell.
OSType
Gets the current OS type
getPath(File)
- Static method in class org.utgenome.shell.
ScaffoldGenerator
getPath(File)
- Static method in class org.utgenome.shell.
UTGBShellCommand
getPort()
- Method in class org.utgenome.shell.tomcat.
TomcatServerConfiguration
getPortNumber()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getProgramInfo()
- Static method in class org.utgenome.shell.
UTGBShell
getProjectConfigDir()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getProjectResourcePath(String)
- Method in class org.utgenome.shell.
UTGBShellCommand
getProjectRoot()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getProjectRoot()
- Method in class org.utgenome.shell.
UTGBShellCommand
getProperties()
- Method in class org.utgenome.shell.
POM
getRevision()
- Method in class org.utgenome.shell.
POM
Retrieves Subversion's revision number from the pom.xml file
getRevision()
- Method in class org.utgenome.shell.
POMProperties
getServerURL()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getSubCommandNameSet()
- Static method in class org.utgenome.shell.
UTGBShell
getVersion()
- Method in class org.utgenome.shell.
POM
getVersion()
- Static method in class org.utgenome.shell.
UTGBShell
getWebAppDir()
- Method in class org.utgenome.shell.
UTGBPortableConfig
getWorkingDir()
- Method in class org.utgenome.shell.
UTGBPortableConfig
globalOption
- Variable in class org.utgenome.shell.
UTGBShellCommand
GWT
- Class in
org.utgenome.shell
A sub command for creating a GWT interface
GWT()
- Constructor for class org.utgenome.shell.
GWT
GWTCompile
- Class in
org.utgenome.shell
GWTCompile()
- Constructor for class org.utgenome.shell.
GWTCompile
I
Illumina2Fastq
- Class in
org.utgenome.shell
Illumina2Fastq()
- Constructor for class org.utgenome.shell.
Illumina2Fastq
Import
- Class in
org.utgenome.shell
import command
Import()
- Constructor for class org.utgenome.shell.
Import
Import.FileType
- Enum in
org.utgenome.shell
isDisplayHelp()
- Method in class org.utgenome.shell.
UTGBPortableConfig
isInProjectRoot()
- Method in class org.utgenome.shell.
UTGBShellCommand
isMavenInstalled()
- Static method in class org.utgenome.shell.
Maven
isUseGUI()
- Method in class org.utgenome.shell.
UTGBPortableConfig
isVerbose()
- Method in class org.utgenome.shell.
UTGBPortableConfig
K
Keyword
- Class in
org.utgenome.shell
keyword DB management tool
Keyword()
- Constructor for class org.utgenome.shell.
Keyword
Keyword.SubCommand
- Enum in
org.utgenome.shell
L
loadUsage(String)
- Static method in class org.utgenome.shell.
UTGBShell
loadUTGBConfig()
- Method in class org.utgenome.shell.
UTGBShellCommand
M
main(String[])
- Static method in class org.utgenome.shell.tomcat.
TomcatServer
entry point for running Tomcat from CUI
main(String[])
- Static method in class org.utgenome.shell.
UTGBPortable
entry point of the UTGBServer
main(String[])
- Static method in class org.utgenome.shell.
UTGBPortableWidget
main(String[])
- Static method in class org.utgenome.shell.
UTGBShell
Run UTGB Shell command.
Maven
- Class in
org.utgenome.shell
Maven utility
Maven()
- Constructor for class org.utgenome.shell.
Maven
maven(String)
- Method in class org.utgenome.shell.
UTGBShellCommand
Maven.CommandExecutor
- Class in
org.utgenome.shell
Maven.CommandExecutor()
- Constructor for class org.utgenome.shell.
Maven.CommandExecutor
mkdirs(File)
- Static method in class org.utgenome.shell.
Create
Create directories including its parent folders if not exist
mkdirs(File)
- Static method in class org.utgenome.shell.
ScaffoldGenerator
Create directories including its parent folders if not exist
N
name()
- Method in class org.utgenome.shell.
AddAction
name()
- Method in class org.utgenome.shell.
Clean
name()
- Method in class org.utgenome.shell.
Compile
name()
- Method in class org.utgenome.shell.
Create
name()
- Method in class org.utgenome.shell.
Deploy
name()
- Method in class org.utgenome.shell.
Eclipse
name()
- Method in class org.utgenome.shell.
FastqRename
name()
- Method in class org.utgenome.shell.
FastqToFasta
name()
- Method in class org.utgenome.shell.
FastqToSAM
name()
- Method in class org.utgenome.shell.
GWT
name()
- Method in class org.utgenome.shell.
GWTCompile
name()
- Method in class org.utgenome.shell.
Illumina2Fastq
name()
- Method in class org.utgenome.shell.
Import
name()
- Method in class org.utgenome.shell.
Keyword
name()
- Method in class org.utgenome.shell.
Maven
name()
- Method in class org.utgenome.shell.
Pack
name()
- Method in class org.utgenome.shell.
QSeqToFastq
name()
- Method in class org.utgenome.shell.
Repair
name()
- Method in class org.utgenome.shell.
Sam2Wig
name()
- Method in class org.utgenome.shell.
SAMToFastq
name()
- Method in class org.utgenome.shell.
ScreenShot
name()
- Method in class org.utgenome.shell.
Sequence
name()
- Method in class org.utgenome.shell.
Server
name()
- Method in class org.utgenome.shell.
SVNAdd
name()
- Method in class org.utgenome.shell.
Upgrade
name()
- Method in class org.utgenome.shell.
UTGBShellCommand
newInstance(int)
- Static method in class org.utgenome.shell.tomcat.
TomcatServerConfiguration
O
openURL(String)
- Static method in class org.utgenome.shell.
WebBrowser
org.utgenome.shell
- package org.utgenome.shell
org.utgenome.shell.tomcat
- package org.utgenome.shell.tomcat
OSType
- Enum in
org.utgenome.shell
This class provides information of current OS type.
P
Pack
- Class in
org.utgenome.shell
creating packed FASTA
Pack()
- Constructor for class org.utgenome.shell.
Pack
parse(String)
- Static method in class org.utgenome.shell.
RegionQueryExpr
POM
- Class in
org.utgenome.shell
POM objects corresponds to a Maven project file (pom.xml)
POM()
- Constructor for class org.utgenome.shell.
POM
POMProperties
- Class in
org.utgenome.shell
This class is used for retrieving the revision value described in the pom.xml file
POMProperties()
- Constructor for class org.utgenome.shell.
POMProperties
prepareEnvironmentVariables(File)
- Static method in class org.utgenome.shell.
Maven
prepareTemplatePropeties(UTGBConfig)
- Method in class org.utgenome.shell.
ScaffoldGenerator
projectDir
- Variable in class org.utgenome.shell.
UTGBShell.UTGBShellOption
pushStart()
- Method in class org.utgenome.shell.
UTGBPortableWidget
Q
QSeqToFastq
- Class in
org.utgenome.shell
QSeqToFastq()
- Constructor for class org.utgenome.shell.
QSeqToFastq
R
RegionQueryExpr
- Class in
org.utgenome.shell
RegionQueryExpr()
- Constructor for class org.utgenome.shell.
RegionQueryExpr
registerWAR(String, String)
- Method in class org.utgenome.shell.tomcat.
TomcatServer
Repair
- Class in
org.utgenome.shell
Repair()
- Constructor for class org.utgenome.shell.
Repair
rsync(File, File)
- Static method in class org.utgenome.shell.
Server
rsync(String, String)
- Static method in class org.utgenome.shell.
Server
runCommand(String)
- Static method in class org.utgenome.shell.
UTGBShell
Run UTGB Shell commands
runCommand(UTGBShell.UTGBShellOption, String)
- Static method in class org.utgenome.shell.
UTGBShell
runCommand(UTGBShell.UTGBShellOption, String[])
- Static method in class org.utgenome.shell.
UTGBShell
runCommand(String[])
- Static method in class org.utgenome.shell.
UTGBShell
Run UTGB Shell commands
runInCUIMode()
- Method in class org.utgenome.shell.
UTGBPortable
runInGUIMode()
- Method in class org.utgenome.shell.
UTGBPortable
runMaven(String)
- Static method in class org.utgenome.shell.
Maven
runMaven(String, File)
- Static method in class org.utgenome.shell.
Maven
runMaven(String[])
- Static method in class org.utgenome.shell.
Maven
runMaven(String[], File)
- Static method in class org.utgenome.shell.
Maven
S
Sam2Wig
- Class in
org.utgenome.shell
Sam2Wig()
- Constructor for class org.utgenome.shell.
Sam2Wig
SAMToFastq
- Class in
org.utgenome.shell
SAMToFastq()
- Constructor for class org.utgenome.shell.
SAMToFastq
ScaffoldGenerator
- Class in
org.utgenome.shell
Scaffold generator
ScaffoldGenerator(String, Create.ScaffoldFileFilter)
- Constructor for class org.utgenome.shell.
ScaffoldGenerator
ScreenShot
- Class in
org.utgenome.shell
screenshot commant to take a image data of the read view
ScreenShot()
- Constructor for class org.utgenome.shell.
ScreenShot
Sequence
- Class in
org.utgenome.shell
Retrieve the genome sequence from the pack file
Sequence()
- Constructor for class org.utgenome.shell.
Sequence
Server
- Class in
org.utgenome.shell
A UTGB sub command for starting up a UTGB portable server
Server()
- Constructor for class org.utgenome.shell.
Server
ServerListener
- Interface in
org.utgenome.shell
setAjp13port(int)
- Method in class org.utgenome.shell.tomcat.
TomcatServerConfiguration
setButtonMargin(JButton)
- Static method in class org.utgenome.shell.
UTGBPortableWidget
setCatalinaBase(String)
- Method in class org.utgenome.shell.tomcat.
TomcatServerConfiguration
setConfiguration(TomcatServerConfiguration)
- Method in class org.utgenome.shell.tomcat.
TomcatServer
setPort(int)
- Method in class org.utgenome.shell.tomcat.
TomcatServerConfiguration
setProperties(POMProperties)
- Method in class org.utgenome.shell.
POM
setRevision(String)
- Method in class org.utgenome.shell.
POMProperties
setStatus(UTGBPortableWidget.MessageType, String)
- Method in class org.utgenome.shell.
UTGBPortableWidget
setTomcatServerLauncher(TomcatServerLauncher)
- Method in class org.utgenome.shell.
UTGBPortableWidget
setVersion(String)
- Method in class org.utgenome.shell.
POM
SRC_FOLDER
- Static variable in class org.utgenome.shell.
UTGBShellCommand
start()
- Method in class org.utgenome.shell.tomcat.
TomcatServer
Starts a Tomcat server
start()
- Method in class org.utgenome.shell.
UTGBPortable
Starts the web server
start(int, TimeUnit)
- Method in class org.utgenome.shell.
UTGBPortable
startTomcatServer(UTGBPortableConfig)
- Method in class org.utgenome.shell.
UTGBPortable
starts the Tomcat server
stop()
- Method in class org.utgenome.shell.tomcat.
TomcatServer
Stops the tomcat server
stopTomcatServer(UTGBPortableConfig)
- Method in class org.utgenome.shell.
UTGBPortable
stops the Tomcat server
SVNAdd
- Class in
org.utgenome.shell
Sub-command to add the current project to the subversion repository
SVNAdd()
- Constructor for class org.utgenome.shell.
SVNAdd
svnAddDir(String, boolean)
- Method in class org.utgenome.shell.
SVNAdd
svnAddFile(String)
- Method in class org.utgenome.shell.
SVNAdd
svnIgnore(String, String, boolean)
- Method in class org.utgenome.shell.
SVNAdd
T
TomcatServer
- Class in
org.utgenome.shell.tomcat
Embedded Tomcat Server
TomcatServer(int)
- Constructor for class org.utgenome.shell.tomcat.
TomcatServer
Creates a TomcatServer instance with the specified port
TomcatServer(TomcatServerConfiguration)
- Constructor for class org.utgenome.shell.tomcat.
TomcatServer
Configures the tomcat server
TomcatServer.Opt
- Class in
org.utgenome.shell.tomcat
TomcatServer.Opt()
- Constructor for class org.utgenome.shell.tomcat.
TomcatServer.Opt
TomcatServerConfiguration
- Class in
org.utgenome.shell.tomcat
Configuration bean for the
TomcatServer
.
TomcatServerConfiguration()
- Constructor for class org.utgenome.shell.tomcat.
TomcatServerConfiguration
toSilk(UTGBConfig)
- Static method in class org.utgenome.shell.
Repair
toString()
- Method in class org.utgenome.shell.
UTGBPortableConfig
U
updateLink()
- Method in class org.utgenome.shell.
UTGBPortableWidget
Upgrade
- Class in
org.utgenome.shell
Upgrade()
- Constructor for class org.utgenome.shell.
Upgrade
UTGBPortable
- Class in
org.utgenome.shell
The stand-alone UTGB server launcher
UTGBPortable(String[])
- Constructor for class org.utgenome.shell.
UTGBPortable
Create an instance of the UTGBServer
UTGBPortable(UTGBPortableConfig)
- Constructor for class org.utgenome.shell.
UTGBPortable
UTGBPortableConfig
- Class in
org.utgenome.shell
The configuration parameters of the UTGBPortable
UTGBPortableConfig()
- Constructor for class org.utgenome.shell.
UTGBPortableConfig
UTGBPortableConfig(int, String, String)
- Constructor for class org.utgenome.shell.
UTGBPortableConfig
UTGBPortableWidget
- Class in
org.utgenome.shell
GUI Panel of the UTGB Portable Server
UTGBPortableWidget()
- Constructor for class org.utgenome.shell.
UTGBPortableWidget
UTGBPortableWidget(UTGBPortableConfig)
- Constructor for class org.utgenome.shell.
UTGBPortableWidget
UTGBPortableWidget.MessageType
- Enum in
org.utgenome.shell
UTGBShell
- Class in
org.utgenome.shell
A command line client entry point
UTGBShell()
- Constructor for class org.utgenome.shell.
UTGBShell
UTGBShell.UTGBShellOption
- Class in
org.utgenome.shell
UTGBShell.UTGBShellOption()
- Constructor for class org.utgenome.shell.
UTGBShell.UTGBShellOption
UTGBShellCommand
- Class in
org.utgenome.shell
A common implementation of the UTGBShell's sub commands
UTGBShellCommand()
- Constructor for class org.utgenome.shell.
UTGBShellCommand
UTGBShellException
- Exception in
org.utgenome.shell
UTGBShellException()
- Constructor for exception org.utgenome.shell.
UTGBShellException
UTGBShellException(String, Throwable)
- Constructor for exception org.utgenome.shell.
UTGBShellException
UTGBShellException(String)
- Constructor for exception org.utgenome.shell.
UTGBShellException
UTGBShellException(Throwable)
- Constructor for exception org.utgenome.shell.
UTGBShellException
V
valueOf(String)
- Static method in enum org.utgenome.shell.
Create.OverwriteMode
Returns the enum constant of this type with the specified name.
valueOf(String)
- Static method in enum org.utgenome.shell.
Import.FileType
Returns the enum constant of this type with the specified name.
valueOf(String)
- Static method in enum org.utgenome.shell.
Keyword.SubCommand
Returns the enum constant of this type with the specified name.
valueOf(String)
- Static method in enum org.utgenome.shell.
OSType
Returns the enum constant of this type with the specified name.
valueOf(String)
- Static method in enum org.utgenome.shell.
UTGBPortableWidget.MessageType
Returns the enum constant of this type with the specified name.
values()
- Static method in enum org.utgenome.shell.
Create.OverwriteMode
Returns an array containing the constants of this enum type, in the order they are declared.
values()
- Static method in enum org.utgenome.shell.
Import.FileType
Returns an array containing the constants of this enum type, in the order they are declared.
values()
- Static method in enum org.utgenome.shell.
Keyword.SubCommand
Returns an array containing the constants of this enum type, in the order they are declared.
values()
- Static method in enum org.utgenome.shell.
OSType
Returns an array containing the constants of this enum type, in the order they are declared.
values()
- Static method in enum org.utgenome.shell.
UTGBPortableWidget.MessageType
Returns an array containing the constants of this enum type, in the order they are declared.
W
WEBAPP_FOLDER
- Static variable in class org.utgenome.shell.
UTGBShellCommand
WebBrowser
- Class in
org.utgenome.shell
Open a given URL via OS's default web browser.
WebBrowser()
- Constructor for class org.utgenome.shell.
WebBrowser
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