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org.utgenome.format.fasta
Interface GenomeSequence

All Known Implementing Classes:
CompactACGT, FASTA.RawStringWrapper, Kmer, SmithWatermanAligner.StringWrapper
public interface GenomeSequence

A common interface of genome sequences

Author:
leo

Method Summary
 char charAt(int index)
           
 int length()
           
 

Method Detail

length

int length()

charAt

char charAt(int index)
Parameters:
index - index on the genome sequence (0-origin)
Returns:
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