org.utgenome.util.sv
Class VariationAnnotator

java.lang.Object
  org.utgenome.util.sv.VariationAnnotator

public class VariationAnnotator
extends Object

Annotating structural variation types (e.g., synonymous mutation, frame shift, etc.). This code is based on Higasa-san's Perl script.

Author:

leo, higasa

Constructor Summary

VariationAnnotator()

Method Summary

void	execute()
static void	main(String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

VariationAnnotator

public VariationAnnotator()

Method Detail

main

public static void main(String[] args)

execute

public void execute()
             throws Exception

Throws:

Exception