org.utgenome.util.sv
Enum EnhancedGeneticVariation.MutationType

java.lang.Object
  java.lang.Enum<EnhancedGeneticVariation.MutationType>
      org.utgenome.util.sv.EnhancedGeneticVariation.MutationType

All Implemented Interfaces:

Serializable, Comparable<EnhancedGeneticVariation.MutationType>

Enclosing class:

EnhancedGeneticVariation

public static enum EnhancedGeneticVariation.MutationType
extends Enum<EnhancedGeneticVariation.MutationType>

mutation types (e.g., non-coding, missense, synonymous, non-sense, frame-shift, splice-site mutation, etc.)

Author:

leo

Enum Constant Summary

FS

MS

NA

NC

NS

SN

SS

Field Summary

String

description

Method Summary

static EnhancedGeneticVariation.MutationType	valueOf(String name) Returns the enum constant of this type with the specified name.
static EnhancedGeneticVariation.MutationType[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

NA

public static final EnhancedGeneticVariation.MutationType NA

NC

public static final EnhancedGeneticVariation.MutationType NC

MS

public static final EnhancedGeneticVariation.MutationType MS

SN

public static final EnhancedGeneticVariation.MutationType SN

NS

public static final EnhancedGeneticVariation.MutationType NS

FS

public static final EnhancedGeneticVariation.MutationType FS

SS

public static final EnhancedGeneticVariation.MutationType SS

Field Detail

description

public final String description

Method Detail

values

public static EnhancedGeneticVariation.MutationType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (EnhancedGeneticVariation.MutationType c : EnhancedGeneticVariation.MutationType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static EnhancedGeneticVariation.MutationType valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null