org.utgenome.util.aligner
Class SuffixArrayBuilder.SubArray

java.lang.Object
  extended by org.utgenome.util.aligner.SuffixArrayBuilder.SubArray
All Implemented Interfaces:
RandomAccess
Enclosing class:
SuffixArrayBuilder

public static class SuffixArrayBuilder.SubArray
extends java.lang.Object
implements RandomAccess


Constructor Summary
SuffixArrayBuilder.SubArray(int[] orig, int offset)
           
 
Method Summary
 int get(long index)
           
 void set(long index, int value)
           
 long size()
           
 java.lang.String toString()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

SuffixArrayBuilder.SubArray

public SuffixArrayBuilder.SubArray(int[] orig,
                                   int offset)
Method Detail

get

public int get(long index)
Specified by:
get in interface RandomAccess

set

public void set(long index,
                int value)
Specified by:
set in interface RandomAccess

toString

public java.lang.String toString()
Overrides:
toString in class java.lang.Object

size

public long size()
Specified by:
size in interface RandomAccess


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