org.utgenome.gwt.utgb.server.app
Class SAMViewer

java.lang.Object
  javax.servlet.GenericServlet
      javax.servlet.http.HttpServlet
          org.utgenome.gwt.utgb.server.RequestHandlerBase
              org.utgenome.gwt.utgb.server.WebTrackBase
                  org.utgenome.gwt.utgb.server.app.SAMViewer

All Implemented Interfaces:

Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig, RequestHandler

public class SAMViewer
extends WebTrackBase

Web action: SAMViewer

See Also:

Serialized Form

Field Summary

int	end
String	name
String	revision
String	species Predefined coordinate parameters for GenomeTrack.
int	start
int	width

Constructor Summary

SAMViewer()

Method Summary

void	handle(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response) Handles the HTTP request

Methods inherited from class org.utgenome.gwt.utgb.server.WebTrackBase

createSQL, createSQLFromFile, createSQLStatement, getActionPrefix, getActionSuffix, getDatabaseAccess, getHTTPRequestQueryString, getProjectRootPath, getTrackConfigProperty, loadJSON, loadJSON, openAction, openAction, toJSON

Methods inherited from class org.utgenome.gwt.utgb.server.RequestHandlerBase

doGet, doPost, validate

Methods inherited from class javax.servlet.http.HttpServlet

doDelete, doHead, doOptions, doPut, doTrace, getLastModified, service, service

Methods inherited from class javax.servlet.GenericServlet

destroy, getInitParameter, getInitParameterNames, getServletConfig, getServletContext, getServletInfo, getServletName, init, init, log, log

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

species

public String species

Predefined coordinate parameters for GenomeTrack. Uncomment the following lines if you want to receive these parameter values described in the request URL

revision

public String revision

name

public String name

start

public int start

end

public int end

width

public int width

Constructor Detail

SAMViewer

public SAMViewer()

Method Detail

handle

public void handle(javax.servlet.http.HttpServletRequest request,
                   javax.servlet.http.HttpServletResponse response)
            throws javax.servlet.ServletException,
                   IOException

Description copied from interface: RequestHandler

Handles the HTTP request

Specified by:

handle in interface RequestHandler

Specified by:

handle in class RequestHandlerBase

Parameters:

request - the http servlet request

response - the http servlet response

Throws:

javax.servlet.ServletException

IOException