Uses of Class
org.utgenome.format.FormatConversionReader

Packages that use FormatConversionReader

org.utgenome.format.bed
org.utgenome.format.blast
org.utgenome.format.fastq
org.utgenome.format.sam
org.utgenome.format.wig

Uses of FormatConversionReader in org.utgenome.format.bed

Subclasses of FormatConversionReader in org.utgenome.format.bed

class

BED2SilkReader BED2SilkReader read the input BED data, and the user can read it as if it were a Silk format.

Uses of FormatConversionReader in org.utgenome.format.blast

Subclasses of FormatConversionReader in org.utgenome.format.blast

class

Blast2Silk Converting blast (default) format into Silk

Uses of FormatConversionReader in org.utgenome.format.fastq

Subclasses of FormatConversionReader in org.utgenome.format.fastq

class

FastqToSilkReader Read the FASTQ file input from the given reader as if it were a Silk

Uses of FormatConversionReader in org.utgenome.format.sam

Subclasses of FormatConversionReader in org.utgenome.format.sam

class

SAM2SilkReader Reader for converting SAM into Silk

Uses of FormatConversionReader in org.utgenome.format.wig

Subclasses of FormatConversionReader in org.utgenome.format.wig

class

WIG2SilkReader Stream reader of the WIG data converted to Silk