1 /*--------------------------------------------------------------------------
2 * Copyright 2008 utgenome.org
3 *
4 * Licensed under the Apache License, Version 2.0 (the "License");
5 * you may not use this file except in compliance with the License.
6 * You may obtain a copy of the License at
7 *
8 * http://www.apache.org/licenses/LICENSE-2.0
9 *
10 * Unless required by applicable law or agreed to in writing, software
11 * distributed under the License is distributed on an "AS IS" BASIS,
12 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 * See the License for the specific language governing permissions and
14 * limitations under the License.
15 *--------------------------------------------------------------------------*/
16 //--------------------------------------
17 // utgb-core Project
18 //
19 // AlignmentResult.java
20 // Since: Sep 5, 2008
21 //
22 // $URL$
23 // $Author$
24 //--------------------------------------
25 package org.utgenome.gwt.utgb.client.bio;
26
27 import java.util.ArrayList;
28
29 import com.google.gwt.user.client.rpc.IsSerializable;
30
31 public class AlignmentResult implements IsSerializable {
32
33 private ArrayList<Alignment> alignmentList = new ArrayList<Alignment>();
34 private ArrayList<String> prettyAlignmentList = new ArrayList<String>();
35
36 public AlignmentResult() {
37
38 }
39
40 public void addAlignment(Alignment alignment) {
41 alignmentList.add(alignment);
42 }
43
44 public void addPrettyAlignment(String prettyAlignment) {
45 prettyAlignmentList.add(prettyAlignment);
46 }
47
48 public ArrayList<Alignment> getAlignment() {
49 return alignmentList;
50 }
51
52 public ArrayList<String> getPrettyAlignment() {
53 return prettyAlignmentList;
54 }
55
56 }