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1   /*--------------------------------------------------------------------------
2    *  Copyright 2008 utgenome.org
3    *
4    *  Licensed under the Apache License, Version 2.0 (the "License");
5    *  you may not use this file except in compliance with the License.
6    *  You may obtain a copy of the License at
7    *
8    *     http://www.apache.org/licenses/LICENSE-2.0
9    *
10   *  Unless required by applicable law or agreed to in writing, software
11   *  distributed under the License is distributed on an "AS IS" BASIS,
12   *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13   *  See the License for the specific language governing permissions and
14   *  limitations under the License.
15   *--------------------------------------------------------------------------*/
16  //--------------------------------------
17  // utgb-core Project
18  //
19  // AlignmentResult.java
20  // Since: Sep 5, 2008
21  //
22  // $URL$ 
23  // $Author$
24  //--------------------------------------
25  package org.utgenome.gwt.utgb.client.bio;
26  
27  import java.util.ArrayList;
28  
29  import com.google.gwt.user.client.rpc.IsSerializable;
30  
31  public class AlignmentResult implements IsSerializable {
32  
33  	private ArrayList<Alignment> alignmentList = new ArrayList<Alignment>();
34  	private ArrayList<String> prettyAlignmentList = new ArrayList<String>();
35  
36  	public AlignmentResult() {
37  
38  	}
39  
40  	public void addAlignment(Alignment alignment) {
41  		alignmentList.add(alignment);
42  	}
43  
44  	public void addPrettyAlignment(String prettyAlignment) {
45  		prettyAlignmentList.add(prettyAlignment);
46  	}
47  
48  	public ArrayList<Alignment> getAlignment() {
49  		return alignmentList;
50  	}
51  
52  	public ArrayList<String> getPrettyAlignment() {
53  		return prettyAlignmentList;
54  	}
55  
56  }