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Packages that use Track | |
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org.utgenome.gwt.utgb.client.track | |
org.utgenome.gwt.utgb.client.track.lib | Standard track library for UTGB browser. |
org.utgenome.gwt.utgb.client.track.lib.debug | Tracks for debug purpose |
org.utgenome.gwt.utgb.client.track.lib.old | Old UTGB track library. |
org.utgenome.gwt.utgb.client.track.operation |
Uses of Track in org.utgenome.gwt.utgb.client.track |
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Classes in org.utgenome.gwt.utgb.client.track that implement Track | |
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class |
TrackBase
TrackBase is a base class that supports to implement your own Track s. |
Fields in org.utgenome.gwt.utgb.client.track with type parameters of type Track | |
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protected ArrayList<Track> |
TrackGroup._trackList
|
Methods in org.utgenome.gwt.utgb.client.track that return Track | |
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Track |
TrackFrame.getTrack()
|
abstract Track |
Track.TrackFactory.newInstance()
obtain a new factory instance. |
Methods in org.utgenome.gwt.utgb.client.track that return types with arguments of type Track | |
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List<Track> |
TrackGroup.getAllTrackList()
Get the list of tracks containd in this group, including tracks within the sub groups. |
List<Track> |
TrackGroup.getTrackList()
Get the list of tracks containd in this group, excluding tracks within the sub groups. |
Methods in org.utgenome.gwt.utgb.client.track with parameters of type Track | |
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void |
TrackGroup.addTrack(Track track)
Add a new track to this group. |
int |
TrackLayoutManager.getTrackIndex(Track track)
Return the index of the given track |
int |
TrackQueue.getTrackIndex(Track track)
|
int |
TrackGroup.getTrackIndex(Track track)
Return the index of the given track in the group. |
void |
TrackConfig.init(Track track)
|
void |
TrackGroup.insertTrack(Track track,
int beforeIndex)
Insert a new track before the specified index |
void |
TrackUpdateListener.onInsertTrack(Track track)
When a new track is inserted to the group |
void |
TrackUpdateListenerAdapter.onInsertTrack(Track track)
|
void |
TrackQueue.onInsertTrack(Track track)
|
void |
TrackUpdateListener.onInsertTrack(Track track,
int beforeIndex)
When a new track is inserted to the group |
void |
TrackUpdateListenerAdapter.onInsertTrack(Track track,
int beforeIndex)
|
void |
TrackQueue.onInsertTrack(Track track,
int beforeIndex)
|
void |
TrackUpdateListener.onRemoveTrack(Track track)
When the track is removed from the group |
void |
TrackUpdateListenerAdapter.onRemoveTrack(Track track)
|
void |
TrackQueue.onRemoveTrack(Track track)
|
void |
TrackGroup.removeTrack(Track track)
Remove the specified track from this group. |
Constructors in org.utgenome.gwt.utgb.client.track with parameters of type Track | |
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TrackConfig(Track track)
|
|
TrackFrame(Track track,
int width)
|
|
TrackFrame(Track track,
int width,
int height)
|
Uses of Track in org.utgenome.gwt.utgb.client.track.lib |
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Classes in org.utgenome.gwt.utgb.client.track.lib that implement Track | |
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class |
BEDTrack
Deprecated. Use ReadTrack instead |
class |
ChromosomeMapTrack
ChromosomeMapTrack is for visualizing Chromosome Map. |
class |
CSEGTrack
Track for displaying read data in SEG format. |
class |
DASTrack
DASTrack is for visualizing data that can be located on das data. |
class |
DBSelectTrack
|
class |
GenomeTrack
GenomeTrack for visualizing data on genome sequences using an image URL or an HTML page embedded in IFRAME tag. |
class |
GenomeTrackTextTest
GenomeTrack is for visualizing data that can be located on genome sequences. |
class |
KeywordSearchTrack
Keyword Search using utgb-keyword service |
class |
MiniBrowserTrack
Track for embedding HTML page via iframe tag. |
class |
NavigatorTrack
Navigator of the UTGB |
class |
ParameterTrack
|
class |
ReadTrack
Track for displaying read data in BED,SAM,BAM formats. |
class |
RefSeqTrack
Reference sequence track |
class |
RibbonRulerTrack
Track for displaying ribbon coordinates |
class |
RulerTrack
RulerTrack |
class |
SAMQueryTrack
Track for displaying SAM/BAM query result |
class |
SAMTrack
Track for displaying SAM information |
class |
ScaleBarTrack
Scale bar |
class |
ScrollButtonTrack
ScrollButtonTrack has several move buttons that relocate a TrackWindow. |
class |
SequenceRulerTrack
SequenceRulerTrack is a ruler on an entire sequence (a chromosome or scaffold). |
class |
ToolBoxTrack
ToolBoxTrack has a list of Track s. |
class |
TrackGenTrack
|
class |
TrackTreeTrack
|
class |
ValueSelectorTrack
ValueSelectorTrack displays a set of text values. |
class |
ViewLoaderTrack
Track for loading view files in Silk format. |
class |
WIGGraphCanvasTrack
WIG Track for displaying graph data, including bar chart, heat map, etc. |
class |
WIGTrack
WIG data track |
class |
WindowControlTrack
Track window control buttons |
Methods in org.utgenome.gwt.utgb.client.track.lib with parameters of type Track | |
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void |
TrackTreeTrack.onInsertTrack(Track track)
|
void |
TrackTreeTrack.onInsertTrack(Track track,
int beforeIndex)
|
void |
TrackTreeTrack.onRemoveTrack(Track track)
|
Uses of Track in org.utgenome.gwt.utgb.client.track.lib.debug |
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Classes in org.utgenome.gwt.utgb.client.track.lib.debug that implement Track | |
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class |
DebugToolBoxTrack
A tool box for debug purpose tracks |
class |
PropertyEditTrack
A track for editing TrackGroupProperty |
class |
URLQueryArgumentTrack
|
Uses of Track in org.utgenome.gwt.utgb.client.track.lib.old |
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Classes in org.utgenome.gwt.utgb.client.track.lib.old that implement Track | |
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class |
OldUTGBAddTrackTrack
|
class |
OldUTGBPropertyTrack
|
class |
OldUTGBRulerTrack
|
class |
OldUTGBTrack
|
class |
OperationTrack
|
Methods in org.utgenome.gwt.utgb.client.track.lib.old with parameters of type Track | |
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void |
OldUTGBFrameCommandImpl.execute(Track track)
|
void |
OldUTGBFrameCommandImpl.FrameMoveRelCommand.execute(Track track)
|
void |
OldUTGBFrameCommandImpl.FrameMoveAbsCommand.execute(Track track)
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void |
OldUTGBFrameCommandImpl.FrameZoomAbsCommand.execute(Track track)
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void |
OldUTGBFrameCommandImpl.FrameRevCommand.execute(Track track)
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void |
OldUTGBFrameCommandImpl.FrameParameterSetCommand.execute(Track track)
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void |
OldUTGBFrameCommandImpl.FrameSetStartCommand.execute(Track track)
|
void |
OldUTGBFrameCommandImpl.FrameSetEndCommand.execute(Track track)
|
void |
OldUTGBOperationParser.parse(com.google.gwt.xml.client.Document document,
com.google.gwt.user.client.ui.AbsolutePanel panel,
Track track)
|
protected FrameCommand |
OldUTGBOperationParser.parseCommandNode(com.google.gwt.xml.client.Node commandNode,
Track track)
|
protected MenuOperationItem |
OldUTGBOperationParser.parseMenuItemNode(com.google.gwt.xml.client.Node menuItemNode,
Track track)
|
Operation |
OldUTGBOperationParser.parseOperationNode(com.google.gwt.xml.client.Node operationNode,
Track track)
|
Constructors in org.utgenome.gwt.utgb.client.track.lib.old with parameters of type Track | |
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OldUTGBSubOperationImpl(com.google.gwt.xml.client.Node subOperationNode,
Track track)
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Uses of Track in org.utgenome.gwt.utgb.client.track.operation |
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Fields in org.utgenome.gwt.utgb.client.track.operation declared as Track | |
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protected Track |
OperationImpl.track
|
Methods in org.utgenome.gwt.utgb.client.track.operation that return Track | |
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protected Track |
OperationImpl.getTrack()
|
Methods in org.utgenome.gwt.utgb.client.track.operation with parameters of type Track | |
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void |
FrameCommand.execute(Track track)
|
void |
FrameCommandImpl.execute(Track track)
|
abstract void |
OperationParser.parse(com.google.gwt.xml.client.Document document,
com.google.gwt.user.client.ui.AbsolutePanel panel,
Track track)
|
void |
OperationParser.parse(String operationXMLStr,
com.google.gwt.user.client.ui.AbsolutePanel panel,
Track track)
|
protected abstract FrameCommand |
OperationParser.parseCommandNode(com.google.gwt.xml.client.Node commandNode,
Track track)
|
protected abstract MenuOperationItem |
OperationParser.parseMenuItemNode(com.google.gwt.xml.client.Node menuItemNode,
Track track)
|
abstract Operation |
OperationParser.parseOperationNode(com.google.gwt.xml.client.Node operationNode,
Track track)
|
protected void |
OperationImpl.setTrack(Track track)
|
Constructors in org.utgenome.gwt.utgb.client.track.operation with parameters of type Track | |
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FrameOperation(com.google.gwt.xml.client.Node frameOperationNode,
Track track)
|
|
OperationImpl(Track track)
|
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SubOperation(com.google.gwt.xml.client.Node subOperationNode,
Track track)
|
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