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| Packages that use Read | |
|---|---|
| org.utgenome.format.bed | |
| org.utgenome.gwt.utgb.client.bio | Biological data objects for Google Web Toolkit RPC (Remote Procedure Call). |
| org.utgenome.gwt.utgb.server.app | Contains sample codes of web actions. |
| Uses of Read in org.utgenome.format.bed |
|---|
| Subclasses of Read in org.utgenome.format.bed | |
|---|---|
class |
BEDEntry
Representing each gene line of BED format |
| Uses of Read in org.utgenome.gwt.utgb.client.bio |
|---|
| Subclasses of Read in org.utgenome.gwt.utgb.client.bio | |
|---|---|
class |
BEDGene
Representing each gene line of BED format |
class |
BlastResult
Read with cigar and sequence information |
class |
BSSRead
BSS read data object |
static class |
DASResult.DASFeature
|
class |
Gene
Gene with Exon and CDS regions |
| Methods in org.utgenome.gwt.utgb.client.bio with parameters of type Read | |
|---|---|
void |
GenomeRangeVisitorBase.visitRead(Read r)
|
void |
GenomeRangeVisitor.visitRead(Read r)
|
void |
InfoSilkGenerator.visitRead(Read r)
|
| Constructors in org.utgenome.gwt.utgb.client.bio with parameters of type Read | |
|---|---|
Read(Read other)
|
|
| Uses of Read in org.utgenome.gwt.utgb.server.app |
|---|
| Subclasses of Read in org.utgenome.gwt.utgb.server.app | |
|---|---|
static class |
BSSReadView.BSSAlignment
|
static class |
ChromosomeMap.ReadLocus
|
static class |
MethylViewer.MethlEntry
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