org.utgenome.gwt.utgb.client.bio
Enum CIGAR.Type

java.lang.Object
  java.lang.Enum<CIGAR.Type>
      org.utgenome.gwt.utgb.client.bio.CIGAR.Type

All Implemented Interfaces:

Serializable, Comparable<CIGAR.Type>

Enclosing class:

CIGAR

public static enum CIGAR.Type
extends Enum<CIGAR.Type>
implements Serializable

Enum Constant Summary

Deletions

HardClip

Insertions

Matches

Padding

SkippedRegion

SoftClip

Field Summary

String

shortName

Method Summary

static CIGAR.Type	convert(char c)
String	toString()
static CIGAR.Type	valueOf(String name) Returns the enum constant of this type with the specified name.
static CIGAR.Type[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

Matches

public static final CIGAR.Type Matches

Insertions

public static final CIGAR.Type Insertions

Deletions

public static final CIGAR.Type Deletions

SkippedRegion

public static final CIGAR.Type SkippedRegion

SoftClip

public static final CIGAR.Type SoftClip

HardClip

public static final CIGAR.Type HardClip

Padding

public static final CIGAR.Type Padding

Field Detail

shortName

public final String shortName

Method Detail

values

public static CIGAR.Type[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (CIGAR.Type c : CIGAR.Type.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static CIGAR.Type valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

convert

public static CIGAR.Type convert(char c)
                          throws UTGBClientException

Throws:

UTGBClientException

toString

public String toString()

Overrides:

toString in class Enum<CIGAR.Type>