org.utgenome.format.fasta
Class FASTA.RawStringWrapper

java.lang.Object
  org.utgenome.format.fasta.FASTA.RawStringWrapper

All Implemented Interfaces:

GenomeSequence

Enclosing class:

FASTA

public static class FASTA.RawStringWrapper
extends Object
implements GenomeSequence

Field Summary

String

seq

Constructor Summary

FASTA.RawStringWrapper(String seq)

Method Summary

char	charAt(int index)
int	length()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

seq

public final String seq

Constructor Detail

FASTA.RawStringWrapper

public FASTA.RawStringWrapper(String seq)

Method Detail

length

public int length()

Specified by:

length in interface GenomeSequence

charAt

public char charAt(int index)

Specified by:

charAt in interface GenomeSequence

Parameters:

index - index on the genome sequence (0-origin)

Returns: