compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

provided

The following is a list of provided dependencies for this project. These dependencies are required to compile the application, but should be provided by default when using the library:

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

runtime

The following is a list of runtime dependencies for this project. These dependencies are required to run the application:

provided

The following is a list of provided dependencies for this project. These dependencies are required to compile the application, but should be provided by default when using the library:

Dependency Tree

• org.utgenome.browser:utgb-medaka:war
  • junit:junit:jar
  • org.apache.tomcat:servlet-api:jar
  • com.google.gwt:gwt-user:jar
  • org.utgenome:utgb-core:jar
    • log4j:log4j:jar
    • com.allen_sauer.gwt:gwt-dnd:jar
    • org.xerial:xerial-storage:jar
      • org.xerial:xerial-core:jar
        • org.xerial.thirdparty:org.antlr.antlr2:jar
        • org.xerial.thirdparty:org.antlr.stringtemplate:jar
        • org.xerial.thirdparty:org.antlr.antlr-runtime:jar
        • org.xerial.thirdparty:org.xmlpull.xpp:jar

      • commons-dbutils:commons-dbutils:jar
      • commons-collections:commons-collections:jar
      • org.xerial.thirdparty:org.postgresql.driver:jar

    • com.google.gwt.gears:gwt-google-apis:jar
    • commons-fileupload:commons-fileupload:jar
    • org.xerial:sqlite-jdbc:jar
    • com.google.gwt:gwt-servlet:jar

Dependency Listings

UTGB Medaka

UTGB Medaka Genome Browser

http://utgenome.org/browser/utgb-medaka

JUnit

JUnit is a regression testing framework written by Erich Gamma and Kent Beck. It is used by the developer who implements unit tests in Java.

http://junit.org

Unnamed - org.apache.tomcat:servlet-api:jar:6.0.13

javax.servlet package

Unnamed - com.google.gwt:gwt-user:jar:0.0.2415

UTGB Core

UTGB Core Components

http://utgenome.org/utgb-core

Unnamed - log4j:log4j:jar:1.2.9

Unnamed - com.allen_sauer.gwt:gwt-dnd:jar:2.0.7

Xerial Storage

Xerial Storage: B-Trees, Column-Compressed Storage

http://www.xerial.org/svn/project/XerialJ/trunk/xerial-base/xerial-storage

Xerial Core

Xerial Core: standard utilities for XerialJ project

http://www.xerial.org/svn/project/XerialJ/trunk/xerial-base/xerial-core

Unnamed - org.xerial.thirdparty:org.antlr.antlr2:jar:2.7.7

Unnamed - org.xerial.thirdparty:org.antlr.stringtemplate:jar:3.1b1

Unnamed - org.xerial.thirdparty:org.antlr.antlr-runtime:jar:3.0.1

Unnamed - org.xerial.thirdparty:org.xmlpull.xpp:jar:1.1.3.4.K

DbUtils

A package of Java utility classes for easing JDBC development

http://jakarta.apache.org/commons/${pom.artifactId.substring(8)}/

Collections

Types that extend and augment the Java Collections Framework.

http://jakarta.apache.org/commons/collections/

Unnamed - org.xerial.thirdparty:org.postgresql.driver:jar:8.2-jdbc3

Unnamed - com.google.gwt.gears:gwt-google-apis:jar:1.0.0

FileUpload

The FileUpload component provides a simple yet flexible means of adding support for multipart file upload functionality to servlets and web applications.

http://jakarta.apache.org/commons/fileupload/

SQLite JDBC

SQLite JDBC library

http://www.xerial.org/svn/project/XerialJ/trunk/xerial-base/sqlite-jdbc

Unnamed - com.google.gwt:gwt-servlet:jar:0.0.2415